JOSD1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, JOSD1 mutation is significantly associated with the RNA expression of many other genes, with 2,546 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible JOSD1-associated genes across cancer lineages are RN7SL288P, RNA5SP447, and RNU6-597P. Each is linked with JOSD1 in more than 1 cancer types. Because this analysis shows association rather than direction, both JOSD1-to-partner and partner-to-JOSD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL288P grouped by JOSD1-low versus JOSD1-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (JOSD1→partner) and Y-score (partner→JOSD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRN7SL288P →+1.120+5.357<.001.00632
BLCARNA5SP447 →+0.424+5.329<.001.00631
BLCARNU6-597P →+0.369+5.685<.001.00331
BLCARNU6-898P →+0.349+5.106<.001.00831
COADRNU6-1216P →+0.968+6.122<.001.00231
COADRNY3P2 →+0.873+5.790<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,546 associations by consensus.

RN7SL288P by JOSD1 expression — COAD

Box plot of RN7SL288P in JOSD1-low vs JOSD1-high samples in COAD.

Explore this box plot interactively →

Exploration