JMY

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, JMY mutation is significantly associated with the RNA expression of many other genes, with 19 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible JMY-associated genes across cancer lineages are CRYBB3, HHLA1, and MCHR2. Each is linked with JMY in more than 1 cancer types. Because this analysis shows association rather than direction, both JMY-to-partner and partner-to-JMY results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CRYBB3 grouped by JMY-low versus JMY-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (JMY→partner) and Y-score (partner→JMY) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaCRYBB3 →+0.075+4.152.004.00931
BLOOD_LeukemiaHHLA1 →+0.006+4.551.002.00431
BLOOD_LeukemiaMCHR2 →+0.034+4.539<.001.00731
BLOOD_LeukemiaBSND →+0.018+4.551<.001.00431
BLOOD_LeukemiaKNCN →+0.048+4.276<.001.00731
BLOOD_LeukemiaOR9K2 →+0.021+4.539<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

CRYBB3 by JMY expression — BLOOD_Leukemia

Box plot of CRYBB3 in JMY-low vs JMY-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration