JMJD1C

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, JMJD1C RNA expression is significantly associated with the protein abundance of many other proteins, with 12,898 significant associations in total. GBM shows the largest number of these associations.

The most reproducible JMJD1C-associated proteins across cancer lineages are VCL, FERMT2, and PARVA. Each is linked with JMJD1C in more than 6 cancer types. Because this analysis shows association rather than direction, both JMJD1C-to-partner and partner-to-JMJD1C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, JMJD1C versus VCL in COAD, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (JMJD1C→partner) and Y-score (partner→JMJD1C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADVCL →+0.477+0.378<.001.00237
COADFERMT2 →+0.616+0.340<.001.00336
COADPARVA →+0.469+0.344<.001.00336
LSCCJMJD1C_T505 →+0.416+0.369<.001.00136
PDACJMJD1C_S943 →+0.633+0.384.002<.00127
GBMCNRIP1 →+0.535+0.348<.001.00236
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,898 associations by consensus.

JMJD1C vs VCL — COAD

Per-sample scatter of JMJD1C vs VCL in COAD (Pearson r = 0.32).

Explore this scatter interactively →

Exploration