JDP2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, JDP2 protein abundance is significantly associated with the RNA expression of many other genes, with 2,783 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible JDP2-associated genes across cancer lineages are TNFSF13B, EFEMP1, and MNDA. Each is linked with JDP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both JDP2-to-partner and partner-to-JDP2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, JDP2 versus TNFSF13B in CCRCC, with a Pearson correlation of 0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (JDP2→partner) and Y-score (partner→JDP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCTNFSF13B →+0.701+0.301.001.00332
BRCAEFEMP1 →+1.720+0.787.003.00332
BRCAMNDA →+0.871+0.765.003.00432
UCECRNU6-805P →+1.501+0.679.006.00232
PDACZNF885P →+0.635+0.793.002.00432
OVGRAMD2B →-1.472-0.712.003<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,783 associations by consensus.

JDP2 vs TNFSF13B — CCRCC

Per-sample scatter of JDP2 vs TNFSF13B in CCRCC (Pearson r = 0.35).

Explore this scatter interactively →

Exploration