JAM2

Across TCGA patient cohorts, JAM2 mutation is significantly associated with the total protein of many other genes, with 21 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible JAM2-associated genes across cancer lineages are EGFR_pY1068, ER-alpha_pS118, and A-Raf_pS299. Each is linked with JAM2 in more than 1 cancer types. Because this analysis shows association rather than direction, both JAM2-to-partner and partner-to-JAM2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by JAM2-low versus JAM2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (JAM2→partner) and Y-score (partner→JAM2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	EGFR_pY1068 →	-0.289	-3.459	.006	.005	3	1
UCEC	ER-alpha_pS118 →	-0.312	-1.700	.040	.044	3	1
UCEC	A-Raf_pS299 →	-0.104	-2.321	.040	.034	3	1
UCEC	Gab2 →	+0.350	+1.700	.020	.044	3	1
UCEC	JNK2 →	+0.166	+2.222	.049	.011	3	1
UCEC	MEK1 →	+0.336	+2.222	.030	.011	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

EGFR_pY1068 by JAM2 expression — UCEC

Explore this box plot interactively →