JAGN1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, JAGN1 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,596 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible JAGN1-associated GO terms across cancer lineages are Granulocyte colony-stimulating factor signaling pathway, Neutrophil differentiation, and Mitochondrial disulfide relay system. Each is linked with JAGN1 in more than 18 cancer types. Because this analysis shows association rather than direction, both JAGN1-to-partner and partner-to-JAGN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Granulocyte colony-stimulating factor signaling pathway grouped by JAGN1-low versus JAGN1-high in PANCREAS.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (JAGN1→partner) and Y-score (partner→JAGN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASGranulocyte colony-stimulating factor signaling pathway →+0.274+0.680<.001<.001319
LUNG_NSCLC_LUSCNeutrophil differentiation →+0.274+1.167.001.001317
OESOPHAGUSMitochondrial disulfide relay system →+0.144+0.733.001.001314
LUNG_NSCLC_LUSCProtein import into mitochondrial intermembrane space →+0.153+0.775.001.006313
UPPER_AERODIGESTIVE_TRACTtRNA-type intron splice site recognition and cleavage →+0.113+0.965.001.007312
LARGE_INTESTINEMitochondrial translation →+0.063+0.582<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,596 associations by consensus.

Granulocyte colony-stimulating factor signaling pathway by JAGN1 expression — PANCREAS

Box plot of Granulocyte colony-stimulating factor signaling pathway in JAGN1-low vs JAGN1-high samples in PANCREAS.

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Exploration