ITSN2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ITSN2 protein abundance is significantly associated with the RNA expression of many other genes, with 15,769 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ITSN2-associated genes across cancer lineages are CTSS, SIRPB1, and PTAFR. Each is linked with ITSN2 in more than 6 cancer types. Because this analysis shows association rather than direction, both ITSN2-to-partner and partner-to-ITSN2 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ITSN2→partner) and Y-score (partner→ITSN2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCTSS →+1.104+0.301<.001<.00137
UCECSIRPB1 →+0.641+0.279.004<.00136
OVPTAFR →+1.080+0.304.001<.00136
GBMARHGAP30 →+0.867+0.281<.001<.00136
GBMCSF2RA →+0.878+0.234<.001<.00136
OVDAPP1 →+1.195+0.374<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,769 associations by consensus.

Exploration