ITSN1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ITSN1 mutation is significantly associated with the RNA expression of many other genes, with 456 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ITSN1-associated genes across cancer lineages are TXNL4A, SLC30A9, and CTSS. Each is linked with ITSN1 in more than 1 cancer types. Because this analysis shows association rather than direction, both ITSN1-to-partner and partner-to-ITSN1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ITSN1→partner) and Y-score (partner→ITSN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINETXNL4A →+0.763+3.743<.001<.00132
LARGE_INTESTINESLC30A9 →+0.493+2.628<.001.00232
LARGE_INTESTINECTSS →-1.950-2.541.003.00532
LARGE_INTESTINEH2AZ1 →+0.656+3.389<.001.00132
LARGE_INTESTINEBCL2 →+0.678+2.628.006.00232
LARGE_INTESTINEPARD6G →+1.081+3.743<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 456 associations by consensus.

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