ITPKC

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ITPKC protein abundance is significantly associated with the RNA expression of many other genes, with 14,898 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible ITPKC-associated genes across cancer lineages are IRAK1BP1, GJB2, and HTR2A. Each is linked with ITPKC in more than 4 cancer types. Because this analysis shows association rather than direction, both ITPKC-to-partner and partner-to-ITPKC results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ITPKC versus IRAK1BP1 in HNSC, with a Pearson correlation of -0.55.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ITPKC→partner) and Y-score (partner→ITPKC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCIRAK1BP1 →-1.040-0.759<.001<.00135
HNSCGJB2 →+1.440+0.422<.001<.00135
GBMHTR2A →-0.545-0.252.006.00534
PDACNISCH →-0.373-0.540<.001<.00134
HNSCATP8A1 →-0.862-0.403.001<.00134
HNSCCOG2 →-0.556-0.534<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,898 associations by consensus.

ITPKC vs IRAK1BP1 — HNSC

Per-sample scatter of ITPKC vs IRAK1BP1 in HNSC (Pearson r = -0.55).

Explore this scatter interactively →

Exploration