ITPA

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ITPA RNA expression is significantly associated with the protein abundance of many other proteins, with 10,905 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ITPA-associated proteins across cancer lineages are TRMT6, ESF1, and MAVS. Each is linked with ITPA in more than 7 cancer types. Because this analysis shows association rather than direction, both ITPA-to-partner and partner-to-ITPA results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ITPA versus TRMT6 in LSCC, with a Pearson correlation of 0.57.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (ITPA→partner) and Y-score (partner→ITPA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCTRMT6 →+0.402+0.528<.001<.00138
LSCCESF1 →+0.373+0.515<.001<.00136
COADMAVS →+0.395+0.639<.001<.00135
COADZCCHC3 →+0.516+0.765<.001<.00135
LSCCPUS7 →+0.685+0.584<.001<.00135
LSCCPCNA →+0.666+0.595<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,905 associations by consensus.

ITPA vs TRMT6 — LSCC

Per-sample scatter of ITPA vs TRMT6 in LSCC (Pearson r = 0.57).

Explore this scatter interactively →

Exploration