ITGB7

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ITGB7 protein abundance is significantly associated with the RNA expression of many other genes, with 9,719 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ITGB7-associated genes across cancer lineages are JAK3, GPR174, and PYHIN1. Each is linked with ITGB7 in more than 5 cancer types. Because this analysis shows association rather than direction, both ITGB7-to-partner and partner-to-ITGB7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ITGB7 versus JAK3 in BRCA, with a Pearson correlation of 0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ITGB7→partner) and Y-score (partner→ITGB7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAJAK3 →+1.455+0.778<.001<.00136
UCECGPR174 →+1.582+0.954.003.00536
BRCAPYHIN1 →+1.183+0.694.004.00236
UCECCD3D →+2.021+1.136.006<.00136
BRCAPRF1 →+1.815+0.752<.001.00236
UCECTIGIT →+1.558+1.159<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,719 associations by consensus.

ITGB7 vs JAK3 — BRCA

Per-sample scatter of ITGB7 vs JAK3 in BRCA (Pearson r = 0.61).

Explore this scatter interactively →

Exploration