ITGAV

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, ITGAV RNA differs between tumor and matched normal tissue in 13 of 18 cancer types tested, making tumor–normal expression one of ITGAV’s most consistent transcriptional readouts.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where ITGAV RNA is more highly expressed in tumor relative to normal tissue. In most cancer types ITGAV is over-expressed in tumor, although a few such as UCEC and KICH show the opposite, repressed pattern.

HNSC, LIHC, and LUAD are the cancer types where ITGAV tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in ITGAV RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
HNSCFemaleIII,IV+2.437<.00111view →
LIHCFemaleII,III,IV+1.447<.0019view →
LUADMaleII,III,IV+1.366<.0018view →
UCECAllAll−1.326<.0016view →
BLCAFemaleAll+1.020.0026view →
BRCAFemaleII,III,IV+0.532<.0016view →
LUSCMaleAll+1.033<.0015view →
KICHAllAll−1.009<.0015view →
STADMaleII,III,IV+1.007.0045view →
CHOLAllAll+3.066<.0013view →
ESCAAllAll+1.219.0013view →
COADMaleII,III,IV+0.516.0073view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 13 lineages.

ITGAV–HNSC

Tumor-vs-normal expression box plot for ITGAV RNA in HNSC.

Open the HNSC breakdown →

Exploration