ITGA3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ITGA3 mutation is significantly associated with the RNA expression of many other genes, with 532 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ITGA3-associated genes across cancer lineages are MYF5, OR1N1, and FAM205A. Each is linked with ITGA3 in more than 1 cancer types. Because this analysis shows association rather than direction, both ITGA3-to-partner and partner-to-ITGA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MYF5 grouped by ITGA3-low versus ITGA3-high in BREAST.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ITGA3→partner) and Y-score (partner→ITGA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTMYF5 →+0.023+5.169<.001.00532
OVARYOR1N1 →+0.298+3.263.001.00632
LARGE_INTESTINEFAM205A →+0.020+3.029<.001.00232
BLOOD_MyelomaC20orf173 →+0.026+3.285<.001.00931
BLOOD_MyelomaHBZ →+0.038+3.716<.001.00531
URINARY_TRACTOR2A2 →+0.046+5.087<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 532 associations by consensus.

MYF5 by ITGA3 expression — BREAST

Box plot of MYF5 in ITGA3-low vs ITGA3-high samples in BREAST.

Explore this box plot interactively →

Exploration