ITGA2B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ITGA2B mutation is significantly associated with the RNA expression of many other genes, with 390 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ITGA2B-associated genes across cancer lineages are SULT2A1, VAPA, and PCCB. Each is linked with ITGA2B in more than 1 cancer types. Because this analysis shows association rather than direction, both ITGA2B-to-partner and partner-to-ITGA2B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SULT2A1 grouped by ITGA2B-low versus ITGA2B-high in CNS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ITGA2B→partner) and Y-score (partner→ITGA2B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSSULT2A1 →+0.055+4.321<.001.00232
LARGE_INTESTINEVAPA →+0.573+3.169.001.00932
LARGE_INTESTINEPCCB →+0.729+3.588<.001<.00132
LARGE_INTESTINEC6orf136 →+0.581+2.451<.001.00932
LUNG_NSCLC_LUADMLC1 →+0.339+2.724.001.00531
LUNG_NSCLC_LUADPAGE4 →+0.269+2.213<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 390 associations by consensus.

SULT2A1 by ITGA2B expression — CNS

Box plot of SULT2A1 in ITGA2B-low vs ITGA2B-high samples in CNS.

Explore this box plot interactively →

Exploration