ITFG2-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, ITFG2-AS1 RNA differs between tumor and matched normal tissue in 9 of 18 cancer types tested, making tumor–normal expression one of ITFG2-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where ITFG2-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types ITFG2-AS1 is over-expressed in tumor, although a few such as THCA and BRCA show the opposite, repressed pattern.

THCA, LIHC, and BRCA are the cancer types where ITFG2-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in ITFG2-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAAllIV−0.682<.00110view →
LIHCMaleAll+0.330<.0016view →
BRCAAllAll−0.302<.0016view →
KIRCAllAll−0.135.0026view →
BLCAAllAll+0.391.0215view →
CHOLAllAll+0.378.0372view →
LUADFemaleII,III,IV−0.281.0282view →
COADAllAll+0.229.0112view →
LUSCAllAll+0.168.0271view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 9 strongest of 9 lineages.

ITFG2-AS1–THCA

Tumor-vs-normal expression box plot for ITFG2-AS1 RNA in THCA.

Open the THCA breakdown →

Exploration