ISOC2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ISOC2 protein abundance is significantly associated with the RNA expression of many other genes, with 10,933 significant associations in total. COAD shows the largest number of these associations.

The most reproducible ISOC2-associated genes across cancer lineages are PFN1, NCAPG, and TTK. Each is linked with ISOC2 in more than 4 cancer types. Because this analysis shows association rather than direction, both ISOC2-to-partner and partner-to-ISOC2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ISOC2 versus PFN1 in COAD, with a Pearson correlation of -0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ISOC2→partner) and Y-score (partner→ISOC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPFN1 →-0.461-0.291<.001.00535
GBMNCAPG →-1.050-0.273<.001.00235
GBMTTK →-1.179-0.315<.001<.00135
GBMZWINT →-1.103-0.381<.001<.00135
COADCOPS3 →-0.580-0.463<.001<.00135
LSCCWRAP53 →-0.457-0.268.003.00435
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,933 associations by consensus.

ISOC2 vs PFN1 — COAD

Per-sample scatter of ISOC2 vs PFN1 in COAD (Pearson r = -0.32).

Explore this scatter interactively →

Exploration