ISOC1

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ISOC1 RNA expression is significantly associated with the RNA expression of many other genes, with 18,935 significant associations in total. UVM shows the largest number of these associations.

The most reproducible ISOC1-associated genes across cancer lineages are FAF2, TMEM161B, and NUDCD2. Each is linked with ISOC1 in more than 33 cancer types. Because this analysis shows association rather than direction, both ISOC1-to-partner and partner-to-ISOC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ISOC1 versus FAF2 in UVM, with a Pearson correlation of 0.71.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ISOC1→partner) and Y-score (partner→ISOC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UVMFAF2 →+0.806+0.644<.001<.001334
UVMTMEM161B →+1.161+0.855<.001<.001334
UVMNUDCD2 →+1.009+0.954<.001<.001334
UVMSLC25A40 →+1.316+0.993<.001<.001334
DLBCCDC23 →+1.123+0.730<.001<.001334
UVMCLINT1 →+1.487+0.979<.001<.001333
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,935 associations by consensus.

ISOC1 vs FAF2 — UVM

Per-sample scatter of ISOC1 vs FAF2 in UVM (Pearson r = 0.71).

Explore this scatter interactively →

Exploration