IRX4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IRX4 protein abundance is significantly associated with the RNA expression of many other genes, with 11,423 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible IRX4-associated genes across cancer lineages are BRMS1L, PFDN4, and RASSF2. Each is linked with IRX4 in more than 1 cancer types. Because this analysis shows association rather than direction, both IRX4-to-partner and partner-to-IRX4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IRX4 versus BRMS1L in BRCA, with a Pearson correlation of -0.61.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IRX4→partner) and Y-score (partner→IRX4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCABRMS1L →-0.738-1.707.003<.00131
BRCAPFDN4 →-0.736-1.114.004.00531
BRCARASSF2 →-1.303-1.123<.001.00631
BRCASMARCA1 →-1.893-1.236<.001.00131
BRCACYB5B →-0.564-1.002.001.00931
BRCAZDHHC2 →-1.262-1.274.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,423 associations by consensus.

IRX4 vs BRMS1L — BRCA

Per-sample scatter of IRX4 vs BRMS1L in BRCA (Pearson r = -0.61).

Explore this scatter interactively →

Exploration