IRF6

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IRF6 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,150 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible IRF6-associated GO terms across cancer lineages are Regulation of inner ear receptor cell differentiation, Cell-cell adhesion mediated by cadherin, and Regulation of mechanoreceptor differentiation. Each is linked with IRF6 in more than 11 cancer types. Because this analysis shows association rather than direction, both IRF6-to-partner and partner-to-IRF6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of inner ear receptor cell differentiation grouped by IRF6-low versus IRF6-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IRF6→partner) and Y-score (partner→IRF6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCRegulation of inner ear receptor cell differentiation →+1.290+3.298<.001<.001312
UPPER_AERODIGESTIVE_TRACTCell-cell adhesion mediated by cadherin →+0.204+1.755.001.006312
LUNG_SCLCRegulation of mechanoreceptor differentiation →+1.290+3.298<.001<.001312
STOMACHNMDA selective glutamate receptor signaling pathway →+0.347+3.235<.001<.001311
URINARY_TRACTSerotonin secretion →+1.693+4.374<.001<.001311
URINARY_TRACTSerotonin production involved in inflammatory response →+1.693+4.374<.001<.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,150 associations by consensus.

Regulation of inner ear receptor cell differentiation by IRF6 expression — LUNG_SCLC

Box plot of Regulation of inner ear receptor cell differentiation in IRF6-low vs IRF6-high samples in LUNG_SCLC.

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Exploration