IQGAP2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IQGAP2 mutation is significantly associated with the RNA expression of many other genes, with 5,280 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IQGAP2-associated genes across cancer lineages are EME1, SOD1, and MIS18A. Each is linked with IQGAP2 in more than 4 cancer types. Because this analysis shows association rather than direction, both IQGAP2-to-partner and partner-to-IQGAP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EME1 grouped by IQGAP2-low versus IQGAP2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IQGAP2→partner) and Y-score (partner→IQGAP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEME1 →+0.450+1.747<.001<.00135
LUSCSOD1 →+0.495+2.724.001.00335
UCECMIS18A →+0.371+1.169.003.00534
UCECSPC24 →+0.483+1.584.001<.00134
UCECPBK →+0.755+2.081<.001<.00134
UCECNPRL2 →+0.235+3.439.002<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,280 associations by consensus.

EME1 by IQGAP2 expression — UCEC

Box plot of EME1 in IQGAP2-low vs IQGAP2-high samples in UCEC.

Explore this box plot interactively →

Exploration