IQCE

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IQCE mutation is significantly associated with the total protein of many other genes, with 27 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IQCE-associated genes across cancer lineages are INPP4B, JNK2, and Notch1. Each is linked with IQCE in more than 3 cancer types. Because this analysis shows association rather than direction, both IQCE-to-partner and partner-to-IQCE results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, INPP4B grouped by IQCE-low versus IQCE-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IQCE→partner) and Y-score (partner→IQCE) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECINPP4B →-0.242-2.906.030.00132
UCECJNK2 →+0.221+1.736.001.00732
COADNotch1 →+0.195+3.008.042.01914
UCECATM →-0.358-2.000.023.03032
UCECCaspase-7-cleavedD198 →+0.800+1.584<.001.03232
COADASNS →+0.894+3.008<.001.01932
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

INPP4B by IQCE expression — UCEC

Box plot of INPP4B in IQCE-low vs IQCE-high samples in UCEC.

Explore this box plot interactively →

Exploration