IPP

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IPP RNA expression is significantly associated with the go_rna of many other GO terms, with 4,577 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible IPP-associated GO terms across cancer lineages are Golgi vesicle transport, Regulation of organelle assembly, and Autophagosome organization. Each is linked with IPP in more than 15 cancer types. Because this analysis shows association rather than direction, both IPP-to-partner and partner-to-IPP results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IPP→partner) and Y-score (partner→IPP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINGolgi vesicle transport →+0.059+0.674<.001<.001316
UPPER_AERODIGESTIVE_TRACTRegulation of organelle assembly →+0.040+0.697<.001.006313
LARGE_INTESTINEAutophagosome organization →+0.052+0.719.001<.001313
STOMACHPositive regulation of organelle assembly →+0.078+0.813<.001.001313
STOMACHCytoskeleton-dependent intracellular transport →+0.066+0.895.002.002312
SKINRetrograde transport, endosome to Golgi →+0.064+0.492<.001.001312
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,577 associations by consensus.

Exploration