INTS4P1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, INTS4P1 mutation is significantly associated with the total protein of many other genes, with 11 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible INTS4P1-associated genes across cancer lineages are FoxM1, FOXO3a_pS318_S321, and Ku80. Each is linked with INTS4P1 in more than 1 cancer types. Because this analysis shows association rather than direction, both INTS4P1-to-partner and partner-to-INTS4P1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FoxM1 grouped by INTS4P1-low versus INTS4P1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (INTS4P1→partner) and Y-score (partner→INTS4P1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFoxM1 →+0.285+3.321.036.01031
UCECFOXO3a_pS318_S321 →-0.141-2.990.031.03631
UCECKu80 →+0.284+2.183.021.03531
UCECNotch1 →+0.204+2.820.005.03531
UCECp62 Lck ligand →+0.639+3.009<.001.01931
UCECCaspase-7-cleavedD198 →+0.860+3.321.005.01031
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

FoxM1 by INTS4P1 expression — UCEC

Box plot of FoxM1 in INTS4P1-low vs INTS4P1-high samples in UCEC.

Explore this box plot interactively →

Exploration