INTS13

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, INTS13 protein abundance is significantly associated with the RNA expression of many other genes, with 18,909 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible INTS13-associated genes across cancer lineages are CCDC77, GINS1, and RAD51AP1. Each is linked with INTS13 in more than 6 cancer types. Because this analysis shows association rather than direction, both INTS13-to-partner and partner-to-INTS13 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, INTS13 versus CCDC77 in LSCC, with a Pearson correlation of 0.60.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (INTS13→partner) and Y-score (partner→INTS13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCCDC77 →+0.720+0.267<.001<.00137
LSCCGINS1 →+1.136+0.375<.001<.00137
BRCARAD51AP1 →+1.052+0.320<.001<.00137
LSCCTTK →+0.847+0.192<.001<.00137
BRCAKIF14 →+1.084+0.292<.001<.00137
HNSCRPIA →+0.741+0.288<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,909 associations by consensus.

INTS13 vs CCDC77 — LSCC

Per-sample scatter of INTS13 vs CCDC77 in LSCC (Pearson r = 0.60).

Explore this scatter interactively →

Exploration