INAVA

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, INAVA mutation is significantly associated with the total protein of many other genes, with 26 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible INAVA-associated genes across cancer lineages are eIF4E, eEF2, and MSH2. Each is linked with INAVA in more than 2 cancer types. Because this analysis shows association rather than direction, both INAVA-to-partner and partner-to-INAVA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eIF4E grouped by INAVA-low versus INAVA-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (INAVA→partner) and Y-score (partner→INAVA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeIF4E →+0.230+2.807.003.00333
UCECeEF2 →+0.460+3.700<.001.00132
UCECMSH2 →-0.203-3.143.019.01832
UCECPCNA →+0.162+1.807.045.02532
UCECShc_pY317 →-0.148-2.807.009.00332
UCECCaspase-7-cleavedD198 →+0.657+3.926.003<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

eIF4E by INAVA expression — UCEC

Box plot of eIF4E in INAVA-low vs INAVA-high samples in UCEC.

Explore this box plot interactively →

Exploration