IL17RA

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IL17RA mutation is significantly associated with the RNA expression of many other genes, with 152 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible IL17RA-associated genes across cancer lineages are NPY, CST9L, and RLN3. Each is linked with IL17RA in more than 1 cancer types. Because this analysis shows association rather than direction, both IL17RA-to-partner and partner-to-IL17RA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NPY grouped by IL17RA-low versus IL17RA-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IL17RA→partner) and Y-score (partner→IL17RA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINNPY →+1.368+3.517.005.00532
SOFT_TISSUECST9L →+0.028+5.369<.001.00431
SOFT_TISSUERLN3 →+0.059+5.369<.001.00431
OESOPHAGUSGH2 →+0.035+4.857<.001<.00131
OESOPHAGUSCCDC42 →+0.057+4.017<.001.00731
OESOPHAGUSCACNG5 →+0.101+4.017<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 152 associations by consensus.

NPY by IL17RA expression — SKIN

Box plot of NPY in IL17RA-low vs IL17RA-high samples in SKIN.

Explore this box plot interactively →

Exploration