IKBIP

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IKBIP mutation is significantly associated with the RNA expression of many other genes, with 97 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible IKBIP-associated genes across cancer lineages are TBC1D21, DACH2, and PROP1. Each is linked with IKBIP in more than 1 cancer types. Because this analysis shows association rather than direction, both IKBIP-to-partner and partner-to-IKBIP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TBC1D21 grouped by IKBIP-low versus IKBIP-high in STOMACH.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IKBIP→partner) and Y-score (partner→IKBIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHTBC1D21 →+0.076+4.129<.001.00732
BLOOD_LeukemiaDACH2 →+0.268+3.944.002.00631
BLOOD_LeukemiaPROP1 →+0.018+3.874.009.00531
BLOOD_LeukemiaSMIM36 →+0.088+4.269<.001.00231
BLOOD_LeukemiaOR1D5 →+0.023+4.384<.001.00631
BLOOD_LeukemiaDMRTC1 →+0.201+3.855.004.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 97 associations by consensus.

TBC1D21 by IKBIP expression — STOMACH

Box plot of TBC1D21 in IKBIP-low vs IKBIP-high samples in STOMACH.

Explore this box plot interactively →

Exploration