IGSF9B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGSF9B protein abundance is significantly associated with the RNA expression of many other genes, with 2,543 significant associations in total. GBM shows the largest number of these associations.

The most reproducible IGSF9B-associated genes across cancer lineages are BEND6, C1GALT1, and RPA3. Each is linked with IGSF9B in more than 1 cancer types. Because this analysis shows association rather than direction, both IGSF9B-to-partner and partner-to-IGSF9B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IGSF9B versus BEND6 in LSCC, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGSF9B→partner) and Y-score (partner→IGSF9B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCBEND6 →+0.523+1.044.002.00432
LSCCC1GALT1 →+0.768+0.926.001.00531
LSCCRPA3 →+0.561+1.139.007<.00131
LSCCTMEM33 →+0.794+1.138<.001<.00131
LSCCOCIAD1 →+0.638+1.107<.001<.00131
LSCCABHD5 →+0.484+0.976<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,543 associations by consensus.

IGSF9B vs BEND6 — LSCC

Per-sample scatter of IGSF9B vs BEND6 in LSCC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration