IGSF8

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IGSF8 mutation is significantly associated with the RNA expression of many other genes, with 89 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible IGSF8-associated genes across cancer lineages are GHRHR, MAGEB5, and C9orf92. Each is linked with IGSF8 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGSF8-to-partner and partner-to-IGSF8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GHRHR grouped by IGSF8-low versus IGSF8-high in LUNG_NSCLC_LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGSF8→partner) and Y-score (partner→IGSF8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCGHRHR →+0.176+4.643<.001.00831
LUNG_NSCLC_LUSCMAGEB5 →+0.033+4.643<.001.00831
BLOOD_LeukemiaC9orf92 →+0.076+4.539<.001.00731
SKINCLEC10A →+0.033+4.273<.001.00631
SKINGAST →+0.824+4.095<.001.00931
SKINPRSS45P →+0.017+4.415<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 89 associations by consensus.

GHRHR by IGSF8 expression — LUNG_NSCLC_LUSC

Box plot of GHRHR in IGSF8-low vs IGSF8-high samples in LUNG_NSCLC_LUSC.

Explore this box plot interactively →

Exploration