IGLV7-46

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGLV7-46 mutation is significantly associated with the RNA expression of many other genes, with 27 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible IGLV7-46-associated genes across cancer lineages are MTATP6P21, MIR5088, and LINC02862. Each is linked with IGLV7-46 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGLV7-46-to-partner and partner-to-IGLV7-46 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGLV7-46→partner) and Y-score (partner→IGLV7-46) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMTATP6P21 →+0.245+4.513<.001.00932
UCECMIR5088 →+0.908+5.621<.001.00431
SKCMLINC02862 →+0.198+4.215<.001.00931
SKCMSPATA31D5P →+0.022+4.381<.001.00631
SKCMRPS3AP17 →+0.052+5.199<.001.00331
LUADLINC00709 →+0.079+7.930<.001.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

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