IGLV4-69

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGLV4-69 mutation is significantly associated with the RNA expression of many other genes, with 94 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible IGLV4-69-associated genes across cancer lineages are BNIP3P4, RNA5SP414, and MIR7702. Each is linked with IGLV4-69 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGLV4-69-to-partner and partner-to-IGLV4-69 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGLV4-69→partner) and Y-score (partner→IGLV4-69) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECBNIP3P4 →+0.109+3.484<.001.00431
UCECRNA5SP414 →+0.895+2.933<.001.00631
UCECMIR7702 →+0.415+5.253<.001.00131
UCECIGKV2OR2-10 →+0.116+3.937.001.00131
UCECRNVU1-28 →+0.743+2.635.003.00831
SKCMRPL35AP →+0.223+4.501<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 94 associations by consensus.

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