IGLV3-22

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGLV3-22 mutation is significantly associated with the RNA expression of many other genes, with 77 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible IGLV3-22-associated genes across cancer lineages are RN7SL196P, SERPINA15P, and MIR6864. Each is linked with IGLV3-22 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGLV3-22-to-partner and partner-to-IGLV3-22 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGLV3-22→partner) and Y-score (partner→IGLV3-22) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LGGRN7SL196P →+0.149+7.977<.001.00732
SKCMSERPINA15P →+0.087+4.624<.001.00532
UCECMIR6864 →+1.056+4.324<.001<.00131
UCECHNRNPCL3 →+0.074+3.608<.001.00231
HNSCMIR512-2 →+0.363+7.954<.001.00831
SKCMMIR6090 →+0.510+4.159<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 77 associations by consensus.

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