IGLV3-21

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGLV3-21 mutation is significantly associated with the RNA expression of many other genes, with 45 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible IGLV3-21-associated genes across cancer lineages are RN7SL39P, NMBR-AS1, and RN7SL764P. Each is linked with IGLV3-21 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGLV3-21-to-partner and partner-to-IGLV3-21 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGLV3-21→partner) and Y-score (partner→IGLV3-21) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRN7SL39P →+0.139+5.292<.001.00632
SKCMNMBR-AS1 →+0.350+5.513<.001.00431
SKCMRN7SL764P →+0.205+5.436<.001.00531
SKCMRN7SL291P →+0.146+5.680<.001.00331
SKCMHMGB1P30 →+0.097+5.292<.001.00631
COADMIR299 →+0.203+7.741<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 45 associations by consensus.

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