IGLV1-40

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGLV1-40 mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible IGLV1-40-associated genes across cancer lineages are MIR6133, MIR6854, and MIRLET7C. Each is linked with IGLV1-40 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGLV1-40-to-partner and partner-to-IGLV1-40 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGLV1-40→partner) and Y-score (partner→IGLV1-40) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR6133 →+0.555+3.982<.001.00331
UCECMIR6854 →+0.373+4.582<.001.00531
UCECMIRLET7C →+0.608+3.599<.001.00731
UCECRNU6-582P →+0.444+5.245<.001.00231
UCECRNA5SP223 →+0.352+4.582<.001.00531
UCECRNU6-444P →+0.767+4.470.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

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