IGKV3D-11

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, IGKV3D-11 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of IGKV3D-11’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where IGKV3D-11 RNA is repressed in tumor relative to normal tissue. In most cancer types IGKV3D-11 is over-expressed in tumor, although a few such as COAD and BRCA show the opposite, repressed pattern.

COAD, LUAD, and KIRC are the cancer types where IGKV3D-11 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in IGKV3D-11 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
COADFemaleAll−2.292<.00110view →
LUADFemaleII,III,IV+2.318<.0019view →
KIRCMaleAll+0.857<.0014view →
BRCAFemaleII,III,IV−0.677.0024view →
READAllAll−2.244.0052view →
LIHCMaleAll−0.743.0052view →
STADAllIV−3.653.0141view →
LUSCAllAll+0.645.0491view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

Exploration