IGKV1D-27

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGKV1D-27 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,926 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible IGKV1D-27-associated GO terms across cancer lineages are Complement activation, Regulation of B cell proliferation, and B cell receptor signaling pathway. Each is linked with IGKV1D-27 in more than 26 cancer types. Because this analysis shows association rather than direction, both IGKV1D-27-to-partner and partner-to-IGKV1D-27 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IGKV1D-27→partner) and Y-score (partner→IGKV1D-27) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
THCAComplement activation →+0.144+1.319<.001<.001327
ESCARegulation of B cell proliferation →+0.061+1.126<.001<.001327
STADB cell receptor signaling pathway →+0.082+1.301<.001<.001327
SARCPositive regulation of tumor necrosis factor superfamily cytokine production →+0.044+0.374<.001<.001326
THCAComplement activation, classical pathway →+0.183+1.340<.001<.001326
ESCACD4-positive, alpha-beta T cell activation →+0.046+1.028<.001<.001326
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,926 associations by consensus.

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