IGKJ3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGKJ3 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,845 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible IGKJ3-associated proteins across cancer lineages are SEPTIN1, WAS, and DOCK2. Each is linked with IGKJ3 in more than 9 cancer types. Because this analysis shows association rather than direction, both IGKJ3-to-partner and partner-to-IGKJ3 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (IGKJ3→partner) and Y-score (partner→IGKJ3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASEPTIN1 →+0.981+2.869<.001<.001310
BRCAWAS →+0.499+2.399<.001<.001310
LSCCDOCK2 →+0.596+1.721<.001<.001310
HNSCGPSM3 →+0.502+2.099<.001.003310
GBMHCLS1 →+0.595+0.976<.001<.001310
BRCAIL16 →+0.659+2.815<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,845 associations by consensus.

Exploration