IGIP

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IGIP RNA expression is significantly associated with the go_rna of many other GO terms, with 4,063 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible IGIP-associated GO terms across cancer lineages are Dendritic transport of messenger ribonucleoprotein complex, Sperm motility, and Flagellated sperm motility. Each is linked with IGIP in more than 16 cancer types. Because this analysis shows association rather than direction, both IGIP-to-partner and partner-to-IGIP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Dendritic transport of messenger ribonucleoprotein complex grouped by IGIP-low versus IGIP-high in LIVER.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (IGIP→partner) and Y-score (partner→IGIP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERDendritic transport of messenger ribonucleoprotein complex →-0.094-1.154.001.003317
UPPER_AERODIGESTIVE_TRACTSperm motility →-0.114-0.879<.001.001314
UPPER_AERODIGESTIVE_TRACTFlagellated sperm motility →-0.114-0.879<.001.001314
CNSNucleolar large rRNA transcription by RNA polymerase I →-0.088-0.624.001<.001314
OESOPHAGUSTarget-directed miRNA degradation →+0.107+1.018<.001.001214
SOFT_TISSUEGolgi vesicle transport →+0.063+0.721<.001<.001313
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,063 associations by consensus.

Dendritic transport of messenger ribonucleoprotein complex by IGIP expression — LIVER

Box plot of Dendritic transport of messenger ribonucleoprotein complex in IGIP-low vs IGIP-high samples in LIVER.

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