IGHV3-74

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV3-74 mutation is significantly associated with the total protein of many other genes, with 5 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible IGHV3-74-associated genes across cancer lineages are NF2, p38-MAPK_pT180_Y182, and Rad50. Each is linked with IGHV3-74 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGHV3-74-to-partner and partner-to-IGHV3-74 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV3-74→partner) and Y-score (partner→IGHV3-74) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMNF2 →+0.349+3.000.019.03631
SKCMp38-MAPK_pT180_Y182 →-0.442-3.000.026.03621
SKCMRad50 →+0.377+2.820.023.03521
SKCMHER2 →+0.478+3.000.003.03611
SKCMCollagen-VI →-0.400-3.000.042.03611
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

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