IGHV3-64

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV3-64 RNA is linked to patient survival in 22 of 34 cancer types, making it the most broadly survival-associated IGHV3-64 data layer compared with 2 for mutation status and 5 for mass-spec protein.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGHV3-64 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated IGHV3-64 expression acts as an unfavorable survival marker, although some lineages such as HNSC and SKCM show a favorable association.

HNSC, SKCM, and UCS are the cancer types where IGHV3-64 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.7750.644<.001144view →
SKCMDFSMedianAll0.6750.558<.001115view →
UCSOSMedianII,III,IV0.6310.221.00372view →
UVMDFSTertileII,III,IV0.3280.689<.00151view →
BLCAOSQuartileAll0.8000.642.00332view →
BRCAOSTertileAll0.6500.493.00724view →
UCECDFSQuartileIII,IV0.7420.131.00324view →
LGGOSTertileAll0.6770.826.00221view →
KIRPDFSQuartileAll0.7631.000.00518view →
LUSCOSMedianII,III,IV0.3340.495.00917view →
COADOSMedianAll0.7610.541.01117view →
PAADOSTertileII,III,IV0.6990.464.01014view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 22 lineages.

Exploration