IGHV3-21

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV3-21 mass-spec protein is linked to patient survival in 5 of 34 cancer types, making it a survival-associated IGHV3-21 data layer compared with 24 for mass-spec protein and 3 for mutation status.

The strongest signal is observed in lung adenocarcinoma (LUAD), where higher IGHV3-21 mass-spec protein is associated with worse overall survival. In most high-consensus cancer types, elevated IGHV3-21 expression acts as an unfavorable survival marker, although some lineages such as PDAC and CCRCC show a favorable association.

LUAD, HNSC, and PDAC are the cancer types where IGHV3-21 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LUADOSMedianII,III,IV0.4560.850<.00140view →
HNSCOSQuartileIII,IV0.5140.883.00315view →
PDACOSTertileAll0.8090.122.02413view →
CCRCCDFSMedianAll1.0000.607.0267view →
GBMOSTertileAll1.0000.856.0241view →
Pink = unfavorable, green = favorable. Showing the 5 strongest of 5 lineages.

Exploration