IGHV3-11

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHV3-11 RNA is linked to patient survival in 25 of 34 cancer types, making it the most broadly survival-associated IGHV3-11 data layer compared with 1 for mutation status and 5 for mass-spec protein.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGHV3-11 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated IGHV3-11 expression acts as an unfavorable survival marker, although some lineages such as HNSC and SKCM show a favorable association.

HNSC, SKCM, and UVM are the cancer types where IGHV3-11 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianAll0.3930.263<.001144view →
SKCMDFSTertileAll0.6900.536<.001108view →
UVMOSMedianII,III,IV0.4490.741.00576view →
BRCADFSQuartileAll0.6400.481.00167view →
UCECDFSTertileIII,IV0.8480.706.00830view →
KIRPOSTertileII,III,IV0.5800.885.00628view →
COADDFSMedianII,III,IV0.8710.678.00127view →
SARCOSMedianAll0.8260.627.00126view →
LUADDFSMedianII,III,IV0.6560.477.01719view →
UCSOSMedianII,III,IV0.6860.355.02014view →
GBMOSTertileAll0.3040.523.01213view →
OVDFSTertileIII,IV0.4250.341.02012view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 25 lineages.

Exploration