IGHV1-45

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHV1-45 mutation is significantly associated with the RNA expression of many other genes, with 279 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible IGHV1-45-associated genes across cancer lineages are RNASEK-C17orf49, DAPK3, and ARRDC1-AS1. Each is linked with IGHV1-45 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGHV1-45-to-partner and partner-to-IGHV1-45 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHV1-45→partner) and Y-score (partner→IGHV1-45) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNASEK-C17orf49 →+0.408+3.332<.001.00532
UCECDAPK3 →+0.643+3.354.001.00532
SKCMARRDC1-AS1 →+0.518+3.651<.001.00132
SKCMPIN1 →+0.468+2.604.001.00532
SKCMDPM2 →+0.450+3.341.004.00532
SKCMMRPL54 →+0.479+2.706.001.00332
Each partner links to its Q-omics profile. Showing the 6 strongest of 279 associations by consensus.

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