IGHJ2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHJ2 mutation is significantly associated with the RNA expression of many other genes, with 21 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible IGHJ2-associated genes across cancer lineages are MIR6752, MTND1P33, and OR7E53P. Each is linked with IGHJ2 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGHJ2-to-partner and partner-to-IGHJ2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHJ2→partner) and Y-score (partner→IGHJ2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMIR6752 →+0.607+6.199<.001.00131
SKCMMTND1P33 →+0.065+6.624<.001.00131
SKCMOR7E53P →+0.128+5.292<.001.00631
SKCMTUBBP11 →+0.199+4.979.001.00931
SKCMRN7SL446P →+0.201+5.513<.001.00431
SKCMC5orf66-AS2 →+0.028+5.362<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

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