IGHG4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGHG4 protein abundance is significantly associated with the RNA expression of many other genes, with 12,081 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible IGHG4-associated genes across cancer lineages are IGHE, IGHV1-67, and CYTH4. Each is linked with IGHG4 in more than 4 cancer types. Because this analysis shows association rather than direction, both IGHG4-to-partner and partner-to-IGHG4 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGHG4→partner) and Y-score (partner→IGHG4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCIGHE →+1.230+0.992<.001<.00135
LUADIGHV1-67 →+1.089+0.672<.001.00135
HNSCCYTH4 →+0.790+0.562<.001.00134
HNSCASF1B →-0.820-0.556.002.00334
GBMTNFSF8 →+0.838+0.633<.001<.00134
LSCCP2RX1 →+0.820+0.737<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,081 associations by consensus.

Exploration