IGHD6-19

RNA & survival
SurvivalRNAKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHD6-19 RNA is linked to patient survival in 12 of 34 cancer types, making it the most broadly survival-associated IGHD6-19 data layer.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where higher IGHD6-19 RNA is associated with better disease-free survival. In most high-consensus cancer types, elevated IGHD6-19 expression acts as an unfavorable survival marker, although some lineages such as HNSC and OV show a favorable association.

HNSC, OV, and SKCM are the cancer types where IGHD6-19 RNA most reproducibly stratifies survival.

RNA survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSTertileIII,IV0.5810.249<.001123view →
OVDFSTertileAll0.2900.146.01054view →
SKCMDFSTertileAll0.8710.716.00640view →
KICHDFSTertileAll0.1020.848.00439view →
LAMLDFSMedianAll0.2730.498.01438view →
THYMOSTertileAll0.6420.944<.00136view →
ESCADFSTertileII,III,IV0.5590.303.01230view →
DLBCOSTertileIII,IV0.1721.000.01427view →
PCPGOSTertileAll0.9140.991.01015view →
LIHCDFSTertileII,III,IV0.0200.414<.0019view →
LUADOSTertileII,III,IV0.7050.525.0354view →
BRCAOSTertileIV1.0000.644.0443view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 12 lineages.

Exploration