IGHD

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, IGHD mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated IGHD data layer compared with 19 for mass-spec protein and 4 for mutation status.

The strongest signal is observed in colon adenocarcinoma (COAD), where higher IGHD mass-spec protein is associated with worse disease-free survival. In most high-consensus cancer types, elevated IGHD expression acts as an unfavorable survival marker, although some lineages such as CCRCC and LSCC show a favorable association.

COAD, CCRCC, and UCEC are the cancer types where IGHD mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
COADDFSMedianII,III,IV0.8721.000.01236view →
CCRCCOSQuartileAll0.9490.686.00920view →
UCECDFSMedianIII,IV0.4241.000.00318view →
PDACOSMedianIV0.3810.951.0069view →
LSCCDFSTertileIII,IV0.9840.590.0377view →
LUADOSMedianAll0.9340.988.0205view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

Exploration