IGFBP4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, IGFBP4 protein abundance is significantly associated with the RNA expression of many other genes, with 14,586 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible IGFBP4-associated genes across cancer lineages are TIMP1, MEDAG, and CD93. Each is linked with IGFBP4 in more than 6 cancer types. Because this analysis shows association rather than direction, both IGFBP4-to-partner and partner-to-IGFBP4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IGFBP4 versus TIMP1 in GBM, with a Pearson correlation of 0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGFBP4→partner) and Y-score (partner→IGFBP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTIMP1 →+1.246+0.472<.001<.00137
LUADMEDAG →+1.290+0.391<.001<.00137
OVCD93 →+0.923+0.711<.001.00337
HNSCFGF7 →+1.032+0.320<.001<.00137
OVDACT1 →+1.494+0.721<.001<.00137
OVIGFBP7 →+1.170+0.788<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,586 associations by consensus.

IGFBP4 vs TIMP1 — GBM

Per-sample scatter of IGFBP4 vs TIMP1 in GBM (Pearson r = 0.38).

Explore this scatter interactively →

Exploration