IGFBP4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, IGFBP4 mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible IGFBP4-associated genes across cancer lineages are MAGEB5, ETDC, and SLC5A7. Each is linked with IGFBP4 in more than 1 cancer types. Because this analysis shows association rather than direction, both IGFBP4-to-partner and partner-to-IGFBP4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MAGEB5 grouped by IGFBP4-low versus IGFBP4-high in LUNG_NSCLC_LUSC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IGFBP4→partner) and Y-score (partner→IGFBP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCMAGEB5 →+0.033+4.643<.001.00831
LARGE_INTESTINEETDC →+0.800+5.415<.001.00431
BLOOD_LeukemiaSLC5A7 →+0.006+4.922<.001.00931
BLOOD_LeukemiaGALP →+0.027+5.201.005.00631
BLOOD_LeukemiaFAM240A →+0.025+5.201<.001.00631
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

MAGEB5 by IGFBP4 expression — LUNG_NSCLC_LUSC

Box plot of MAGEB5 in IGFBP4-low vs IGFBP4-high samples in LUNG_NSCLC_LUSC.

Explore this box plot interactively →

Exploration