IFT88

Across TCGA patient cohorts, IFT88 RNA expression is significantly associated with the RNA expression of many other genes, with 21,039 significant associations in total. UVM shows the largest number of these associations.

The most reproducible IFT88-associated genes across cancer lineages are DDX17, SUPT20H, and RPGRIP1L. Each is linked with IFT88 in more than 33 cancer types. Because this analysis shows association rather than direction, both IFT88-to-partner and partner-to-IFT88 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, IFT88 versus DDX17 in UVM, with a Pearson correlation of 0.90.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (IFT88→partner) and Y-score (partner→IFT88) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UVM	DDX17 →	+1.446	+1.339	<.001	<.001	3	34
UVM	SUPT20H →	+1.332	+1.443	<.001	<.001	3	34
KIRP	RPGRIP1L →	+0.785	+0.865	<.001	<.001	3	34
UVM	AKAP10 →	+1.546	+1.455	<.001	<.001	3	34
UVM	PRPF4B →	+1.803	+1.427	<.001	<.001	3	34
UVM	DNAL1 →	+1.127	+1.468	<.001	<.001	3	34

Each partner links to its Q-omics profile. Showing the 6 strongest of 21,039 associations by consensus.

IFT88 vs DDX17 — UVM

Explore this scatter interactively →